Translating the Observational Medical Outcomes Partnership - Common Data Model (OMOP-CDM) electronic health records to an OWL ontology - Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé Accéder directement au contenu
Communication Dans Un Congrès Année : 2021

Translating the Observational Medical Outcomes Partnership - Common Data Model (OMOP-CDM) electronic health records to an OWL ontology

Résumé

The heterogeneity of electronic health records model is a major problem: it is necessary to gather data from various models for clinical research, but also for clinical decision support. The Observational Medical Outcomes Partnership-Common Data Model (OMOP-CDM) has emerged as a standard model for structuring health records populated from various other sources. This model is proposed as a relational database schema. However, in the field of decision support, formal ontologies are commonly used. In this paper, we propose a translation of OMOP-CDM into an ontology, and we explore the utility of the semantic web for structuring EHR in a clinical decision support perspective, and the use of the SPARQL language for querying health records. The resulting ontology is available online.
Fichier principal
Vignette du fichier
t.pdf (333.82 Ko) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)

Dates et versions

hal-03479322 , version 1 (14-12-2021)

Identifiants

  • HAL Id : hal-03479322 , version 1

Citer

Jean-Baptiste Lamy, Abdelmalek Mouazer, Karima Sedki, Rosy Tsopra. Translating the Observational Medical Outcomes Partnership - Common Data Model (OMOP-CDM) electronic health records to an OWL ontology. MEDINFO 2021 - 18th World Congress of Medical and Health Informatics, Oct 2021, online, France. ⟨hal-03479322⟩
220 Consultations
376 Téléchargements

Partager

Gmail Facebook X LinkedIn More